Structure of PDB 4ozn Chain B Binding Site BS02
Receptor Information
>4ozn Chain B (length=104) Species:
523841
(Haloferax mediterranei ATCC 33500) [
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DLPNDGGIKLVMAIIRPDKLADVKTALAEVGAPSLTVTNVSGRGSDLHQK
VKVECVVADTPAEDVADAIADAAHTGEKGDGKIFILPVENAIQVRTGKTG
RDAV
Ligand information
Ligand ID
ATP
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C10 H16 N5 O13 P3
Name
ADENOSINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL14249
DrugBank
DB00171
ZINC
ZINC000004261765
PDB chain
4ozn Chain B Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
4ozn
The structure of a PII signaling protein from a halophilic archaeon reveals novel traits and high-salt adaptations.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
I18 G46 R47 G48 K97 G98 G100 K101
Binding residue
(residue number reindexed from 1)
I14 G42 R43 G44 K78 G79 G81 K82
Annotation score
4
Binding affinity
PDBbind-CN
: -logKd/Ki=5.40,Kd=4uM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0030234
enzyme regulator activity
Biological Process
GO:0006808
regulation of nitrogen utilization
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4ozn
,
PDBe:4ozn
,
PDBj:4ozn
PDBsum
4ozn
PubMed
24946894
UniProt
B8ZYW1
|GLNK2_HALMT Nitrogen regulatory protein GlnK2 (Gene Name=glnK2)
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