Structure of PDB 4lxz Chain B Binding Site BS02
Receptor Information
>4lxz Chain B (length=367) Species:
9606
(Homo sapiens) [
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KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPH
KATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLF
EFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIV
LAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPG
TGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAV
VLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRN
VARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPE
YMEKIKQRLFENLRMLP
Ligand information
Ligand ID
CA
InChI
InChI=1S/Ca/q+2
InChIKey
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
Formula
Ca
Name
CALCIUM ION
ChEMBL
DrugBank
DB14577
ZINC
PDB chain
4lxz Chain B Residue 402 [
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Receptor-Ligand Complex Structure
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PDB
4lxz
Histone Deacetylase (HDAC) Inhibitor Kinetic Rate Constants Correlate with Cellular Histone Acetylation but Not Transcription and Cell Viability.
Resolution
1.85 Å
Binding residue
(original residue number in PDB)
D179 D181 H183 S202 F203
Binding residue
(residue number reindexed from 1)
D167 D169 H171 S190 F191
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.5.1.-
3.5.1.98
: histone deacetylase.
Gene Ontology
Molecular Function
GO:0004407
histone deacetylase activity
View graph for
Molecular Function
External links
PDB
RCSB:4lxz
,
PDBe:4lxz
,
PDBj:4lxz
PDBsum
4lxz
PubMed
23897821
UniProt
Q92769
|HDAC2_HUMAN Histone deacetylase 2 (Gene Name=HDAC2)
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