Structure of PDB 4k28 Chain B Binding Site BS02

Receptor Information

>4k28 Chain B (length=266) Species: 160488 (Pseudomonas putida KT2440) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

RGSTELVAIVGSPIAQVKSPQNFNTWFNHNNCNLAMLPIDLHEAALDSFA
DTLRGWQNLRGCVVTVPYKQALANRVDGLSERAAALGSINVIRRERDGRL
LGDNVDGAGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAEAGIASI
TLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGMGTR
AELPLSAALLATLQPDTLVADVVTSPEITPLLNRARQVGCRIQTGPEMAF
AQLGHLGAFMGVTPLE

Ligand information

Ligand ID

InChI

InChI=1S/Mn/q+2

InChIKey

WAEMQWOKJMHJLA-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mn+2]
CACTVS 3.341	[Mn++]

Formula

Name

MANGANESE (II) ION

PDB chain

4k28 Chain B Residue 305 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	4k28 Insights into the function of RifI2: structural and biochemical investigation of a new shikimate dehydrogenase family protein.
Resolution	2.15 Å
Binding residue (original residue number in PDB)	C166 V178
Binding residue (residue number reindexed from 1)	C164 V176
Annotation score	1

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0000166	nucleotide binding
GO:0004764	shikimate 3-dehydrogenase (NADP+) activity
GO:0016491	oxidoreductase activity
GO:0046872	metal ion binding
GO:0050661	NADP binding

	Biological Process
GO:0009423	chorismate biosynthetic process
GO:0019632	shikimate metabolic process

	Cellular Component
GO:0005829	cytosol

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:4k28, PDBe:4k28, PDBj:4k28
PDBsum	4k28
PubMed	23142411
UniProt	Q88JP1

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