Structure of PDB 4hrr Chain B Binding Site BS02
Receptor Information
>4hrr Chain B (length=151) [
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SRVAELANAVVSNADQKDLLRMSWGVLSVDMEGTGLMLMANLFKTSPSAK
GKFARLGDVSAGKDNSKLRGHSITLMYALQNFVDALDDVERLKCVVEKFA
VNHINRQISADEFGEIVGPLRQTLKARMGNYFDEDTVAAWASLVAVVQAA
L
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
4hrr Chain B Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
4hrr
Tertiary and Quaternary Allostery in Tetrameric Hemoglobin from Scapharca inaequivalvis.
Resolution
1.25 Å
Binding residue
(original residue number in PDB)
F53 R55 H71 L75 L79 F99 N102 H103 R106 I108 E112 F113 I116
Binding residue
(residue number reindexed from 1)
F53 R55 H71 L75 L79 F99 N102 H103 R106 I108 E112 F113 I116
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005344
oxygen carrier activity
GO:0019825
oxygen binding
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0001666
response to hypoxia
GO:0015671
oxygen transport
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Molecular Function
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Biological Process
External links
PDB
RCSB:4hrr
,
PDBe:4hrr
,
PDBj:4hrr
PDBsum
4hrr
PubMed
23458680
UniProt
P14822
|GLB2B_ANAIN Globin-2 B chain
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