Structure of PDB 4dt2 Chain B Binding Site BS02
Receptor Information
>4dt2 Chain B (length=426) Species:
3885
(Phaseolus vulgaris) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KNRDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSA
VRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVG
LRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKG
QTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEF
APEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAY
GRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTK
FEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVY
ITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNR
NQDGVAVEADSVWFFNRHWYPVDDST
Ligand information
Ligand ID
FE
InChI
InChI=1S/Fe/q+3
InChIKey
VTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Fe+3]
Formula
Fe
Name
FE (III) ION
ChEMBL
DrugBank
DB13949
ZINC
PDB chain
4dt2 Chain B Residue 502 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4dt2
Identification of purple acid phosphatase inhibitors by fragment-based screening: promising new leads for osteoporosis therapeutics.
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
D135 D164 Y167 H325
Binding residue
(residue number reindexed from 1)
D129 D158 Y161 H319
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
D135 D164 Y167 N201 H202 H286 H295 H296 H323 H325
Catalytic site (residue number reindexed from 1)
D129 D158 Y161 N195 H196 H280 H289 H290 H317 H319
Enzyme Commision number
3.1.3.2
: acid phosphatase.
Gene Ontology
Molecular Function
GO:0003993
acid phosphatase activity
GO:0008199
ferric iron binding
GO:0008270
zinc ion binding
GO:0016787
hydrolase activity
GO:0046872
metal ion binding
Cellular Component
GO:0005576
extracellular region
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:4dt2
,
PDBe:4dt2
,
PDBj:4dt2
PDBsum
4dt2
PubMed
22943065
UniProt
P80366
|PPAF_PHAVU Fe(3+)-Zn(2+) purple acid phosphatase
[
Back to BioLiP
]