Structure of PDB 4df9 Chain B Binding Site BS02

Receptor Information
>4df9 Chain B (length=403) Species: 272559 (Bacteroides fragilis NCTC 9343) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NFSDYFTNKTLRIDYLFTGNADKQSICLDELSELPVWAGRRHHLSELPLE
GNGQIVMRDVASGKVIYTTSFSSLFQEWLETDEAKEVTKGFENTYLLPYP
IKPAEVEITLRNNKREVSANLKHVVKPDDILIHKKGLTHITPHKYLLKSG
NEEQCIDVAILAEGYTTSEMETFYKDAAIACEALFSHEPFQSMKNRFNIV
AVASPSADSGVSAPKQGAWKHTAFGSHFDTFYSDRYLTTSRVKAINDALA
GIPYEHIIILANTEQYGGGGIYNAFTLTTAHHPNFRPVVVHEFGHSFGGL
ADEYFYDEDGLYPLNIEPWEQNITTRINFASKWEDMLTKTTPVPTPVADK
AKYPIGVYEGGGYSAKGIYRPAFDCRMRTNEYPTFCPVCQRAIQRIIEFY
TGK
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain4df9 Chain B Residue 503 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4df9 Crystal structure of a putative peptidase (BF3526) from Bacteroides fragilis NCTC 9343 at 2.17 A resolution
Resolution2.17 Å
Binding residue
(original residue number in PDB)		E323 C398 C409 C412
Binding residue
(residue number reindexed from 1)		E303 C375 C386 C389
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008237 metallopeptidase activity

View graph for
Molecular Function
External links
PDB RCSB:4df9, PDBe:4df9, PDBj:4df9
PDBsum4df9
PubMed
UniProtQ5L9L3

[Back to BioLiP]