Structure of PDB 4db2 Chain B Binding Site BS02
Receptor Information
>4db2 Chain B (length=256) Species:
4932
(Saccharomyces cerevisiae) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SIDQSVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLC
SILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGM
DFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRE
LEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVISLISSYRSC
IKEYRFSERRILPEIASTYGVLLNDPQLKIPVSRRFLDKLGLSRSPIGKA
MFEIRD
Ligand information
>4db2 Chain J (length=14) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gggcgggcccgccc
..............
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4db2
Structural basis for RNA-duplex recognition and unwinding by the DEAD-box helicase Mss116p.
Resolution
3.157 Å
Binding residue
(original residue number in PDB)
T382 V383 G408 R415 T433 D434 V435 G436 S535 S536
Binding residue
(residue number reindexed from 1)
T42 V43 G68 R75 T93 D94 V95 G96 S195 S196
Enzymatic activity
Enzyme Commision number
3.6.4.13
: RNA helicase.
External links
PDB
RCSB:4db2
,
PDBe:4db2
,
PDBj:4db2
PDBsum
4db2
PubMed
22940866
UniProt
P15424
|MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial (Gene Name=MSS116)
[
Back to BioLiP
]
