Structure of PDB 4d90 Chain B Binding Site BS02

Receptor Information
>4d90 Chain B (length=126) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
CDPNPCENGGICLPFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPN
PCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNG
GICTDLVANYSCECPGEFMGRNCQYK
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain4d90 Chain B Residue 604 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4d90 The RGD finger of Del-1 is a unique structural feature critical for integrin binding.
Resolution2.601 Å
Binding residue
(original residue number in PDB)		N119 I120 E122 D136 L137
Binding residue
(residue number reindexed from 1)		N88 I89 E91 D105 L106
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding

View graph for
Molecular Function
External links
PDB RCSB:4d90, PDBe:4d90, PDBj:4d90
PDBsum4d90
PubMed22601780
UniProtO43854|EDIL3_HUMAN EGF-like repeat and discoidin I-like domain-containing protein 3 (Gene Name=EDIL3)

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