Structure of PDB 4bnd Chain B Binding Site BS02

Receptor Information
>4bnd Chain B (length=253) Species: 416870 (Lactococcus cremoris subsp. cremoris MG1363) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AMKKILSFDIDNTLNEPKMPIFPEMAELLATLSQKYIIAPISGQKYDQFL
IQIINNLPESANLDNFHLFVAQGTQYYAHKAGEWKQVFNYALTDEQANAI
MGALEKAAKELGHWDESVLLPGDEINENRESMIAYSAIGQKAGVEAKQAW
DPDMTKRNEIAKLASQYAPEFEFEVAGTTTINGFVPGQNKEFGMNHLMEE
LNVTKEEILYFGDMTQPGGNDYPVVQMGIETITVRDWKETAAILKAIIAM
EEA
Ligand information
Ligand IDGOL
InChIInChI=1S/C3H8O3/c4-1-3(6)2-5/h3-6H,1-2H2
InChIKeyPEDCQBHIVMGVHV-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.0C(C(CO)O)O
ACDLabs 12.01
CACTVS 3.370		OCC(O)CO
FormulaC3 H8 O3
NameGLYCEROL;
GLYCERIN;
PROPANE-1,2,3-TRIOL
ChEMBLCHEMBL692
DrugBankDB09462
ZINCZINC000000895048
PDB chain4bnd Chain B Residue 1256 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4bnd High-Resolution Structure of an Atypical [Alpha]-Phosphoglucomutase Related to Eukaryotic Phosphomannomutases
Resolution1.5 Å
Binding residue
(original residue number in PDB)		D10 G42 Q43 G176 T179 N181
Binding residue
(residue number reindexed from 1)		D11 G43 Q44 G177 T180 N182
Annotation score1
Enzymatic activity
Enzyme Commision number 5.4.2.8: phosphomannomutase.
Gene Ontology
Molecular Function
GO:0004615 phosphomannomutase activity
GO:0016791 phosphatase activity
GO:0016853 isomerase activity
GO:0046872 metal ion binding
Biological Process
GO:0006013 mannose metabolic process
GO:0006487 protein N-linked glycosylation
GO:0009298 GDP-mannose biosynthetic process
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4bnd, PDBe:4bnd, PDBj:4bnd
PDBsum4bnd
PubMed24100319
UniProtA2RIP9

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