Structure of PDB 3t24 Chain B Binding Site BS02
Receptor Information
>3t24 Chain B (length=368) Species:
287
(Pseudomonas aeruginosa) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
IKDSKASIELRNFYFNRDFRSQSKAEEWAQGFLLRYESGYTEGTIGFGVD
AIGLLGVKLDSQDDYGEAGITAKLRASKSTLKIGTLTPKLPVIMPNDSRL
LPQTFQGGALNSMEIDGLTLDAGRLKKVNQRDSDNEDMTITGGGKRQIVV
RSGLTSDKFDFAGGSYKWTDNLSTSYHYGKLDNFYKQHYLGLVHTLPIAD
KQSLKSDIRWARSTDDGSSNVDNKALNAMFTYSLGYHAFGVGYQKMSGDT
GFAYINGADPYLVNFIQIGDFANKDEKSWQARYDYNFAGVGIPGLTFMTR
YVKGDNIDLLTTSGEGKEWERDMDIAYVFQSGPLKNLGVKWRNATMRTNY
TNDYDENRLIVSYTLPLW
Ligand information
Ligand ID
C8E
InChI
InChI=1S/C16H34O5/c1-2-3-4-5-6-7-9-18-11-13-20-15-16-21-14-12-19-10-8-17/h17H,2-16H2,1H3
InChIKey
FEOZZFHAVXYAMB-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O(CCCCCCCC)CCOCCOCCOCCO
CACTVS 3.341
OpenEye OEToolkits 1.5.0
CCCCCCCCOCCOCCOCCOCCO
Formula
C16 H34 O5
Name
(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
ChEMBL
DrugBank
DB04233
ZINC
ZINC000014881140
PDB chain
3t24 Chain B Residue 401 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3t24
Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Resolution
2.4 Å
Binding residue
(original residue number in PDB)
G132 G133
Binding residue
(residue number reindexed from 1)
G107 G108
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0015288
porin activity
Biological Process
GO:0010167
response to nitrate
GO:0055085
transmembrane transport
GO:0071453
cellular response to oxygen levels
Cellular Component
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3t24
,
PDBe:3t24
,
PDBj:3t24
PDBsum
3t24
PubMed
22272184
UniProt
Q9HZH0
[
Back to BioLiP
]