Structure of PDB 3sxt Chain B Binding Site BS02
Receptor Information
>3sxt Chain B (length=357) Species:
318586
(Paracoccus denitrificans PD1222) [
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DDALAALGAQLFVDPALSRNATQSCATCHDPARAFTDPREGKAGLAVSVG
DDGQSHGDRNTPTLGYAALVPAFHRDANGKYKGGQFWDGRADDLKQQAGQ
PMLNPVEMAMPDRAAVAARLRDDPAYRTGFEALFGKGVLDDPERAFDAAA
EALAAYQATGEFSPFDSKYDRVMRGEEKFTPLEEFGYTVFITWNCRLCHM
QRKQGVAERETFTNFEYHNIGLPVNETAREASGLGADHVDHGLLARPGIE
DPAQSGRFKVPSLRNVAVTGPYMHNGVFTDLRTAILFYNKYTSRRPEAKI
NPETGAPWGEPEVARNLSLAELQSGLMLDDGRVDALVAFLETLTDRRYEP
LLEESRA
Ligand information
Ligand ID
HEC
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,9-12H2,1-6H3,(H,39,40)(H,41,42);/q-4;+4/b21-7?,22-8?,26-13-,29-14-,30-15-,31-16-;
InChIKey
HXQIYSLZKNYNMH-LJNAALQVSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)CCC1=C(C2=CC6=C(C(=C/C)\C5=CC4=C(C(\C3=Cc7c(c(c8C=C1N2[Fe](N34)(N56)n78)CCC(=O)O)C)=C/C)C)C)C
OpenEye OEToolkits 1.5.0
CC=C1C(=C2C=C3C(=CC)C(=C4N3[Fe]56N2C1=Cc7n5c(c(c7C)CCC(=O)O)C=C8N6C(=C4)C(=C8CCC(=O)O)C)C)C
CACTVS 3.341
C\C=C1/C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)\C7=C/C)C=C1N2[Fe@@]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
CACTVS 3.341
CC=C1C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)C7=CC)C=C1N2[Fe]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
Formula
C34 H34 Fe N4 O4
Name
HEME C
ChEMBL
DrugBank
ZINC
PDB chain
3sxt Chain B Residue 404 [
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Receptor-Ligand Complex Structure
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PDB
3sxt
Crystal Structure of the Quinol Form of Methylamine Dehydrogenase in Complex with the Diferrous Form of MauG
Resolution
1.81 Å
Binding residue
(original residue number in PDB)
Q29 C31 C34 H35 R65 T67 P68 L70 Q91 F92 W93 R96 Q103 P107 E113 M114 K265
Binding residue
(residue number reindexed from 1)
Q23 C25 C28 H29 R59 T61 P62 L64 Q85 F86 W87 R90 Q97 P101 E107 M108 K259
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
E113
Catalytic site (residue number reindexed from 1)
E107
Enzyme Commision number
1.-.-.-
Gene Ontology
Molecular Function
GO:0004130
cytochrome-c peroxidase activity
GO:0009055
electron transfer activity
GO:0016491
oxidoreductase activity
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0098869
cellular oxidant detoxification
Cellular Component
GO:0042597
periplasmic space
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Molecular Function
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Cellular Component
External links
PDB
RCSB:3sxt
,
PDBe:3sxt
,
PDBj:3sxt
PDBsum
3sxt
PubMed
UniProt
Q51658
|MAUG_PARDP Methylamine utilization protein MauG (Gene Name=mauG)
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