Structure of PDB 3rkq Chain B Binding Site BS02
Receptor Information
>3rkq Chain B (length=57) Species:
9606
(Homo sapiens) [
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GRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWF
QNRRYKS
Ligand information
>3rkq Chain D (length=19) [
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tcaagaggcccccacttca
Receptor-Ligand Complex Structure
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PDB
3rkq
Crystal structure of the human NKX2.5 homeodomain in complex with DNA target.
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
R142 L144 F145 Q181 N188
Binding residue
(residue number reindexed from 1)
R6 L8 F9 Q45 N52
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000981
DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677
DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
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Molecular Function
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Biological Process
External links
PDB
RCSB:3rkq
,
PDBe:3rkq
,
PDBj:3rkq
PDBsum
3rkq
PubMed
22849347
UniProt
P52952
|NKX25_HUMAN Homeobox protein Nkx-2.5 (Gene Name=NKX2-5)
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