Structure of PDB 3rb0 Chain B Binding Site BS02
Receptor Information
>3rb0 Chain B (length=341) Species:
273057
(Saccharolobus solfataricus P2) [
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GIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEA
RKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIE
IASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVF
AKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGIN
KLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVT
MKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGR
TFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI
Ligand information
>3rb0 Chain J (length=15) [
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aacgctaccatccaa
Receptor-Ligand Complex Structure
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PDB
3rb0
Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Resolution
3.225 Å
Binding residue
(original residue number in PDB)
V1032 S1034 G1041 G1218 A1220 R1242 K1243 S1244 I1245 G1246 R1247 I1248 L1293 R1331 R1332 R1336
Binding residue
(residue number reindexed from 1)
V32 S34 G41 G218 A220 R242 K243 S244 I245 G246 R247 I248 L293 R331 R332 R336
Enzymatic activity
Enzyme Commision number
2.7.7.7
: DNA-directed DNA polymerase.
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0003677
DNA binding
GO:0003684
damaged DNA binding
GO:0003887
DNA-directed DNA polymerase activity
GO:0046872
metal ion binding
Biological Process
GO:0006260
DNA replication
GO:0006261
DNA-templated DNA replication
GO:0006281
DNA repair
GO:0006974
DNA damage response
GO:0042276
error-prone translesion synthesis
Cellular Component
GO:0005737
cytoplasm
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External links
PDB
RCSB:3rb0
,
PDBe:3rb0
,
PDBj:3rb0
PDBsum
3rb0
PubMed
21645853
UniProt
Q97W02
|DPO4_SACS2 DNA polymerase IV (Gene Name=dbh)
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