Structure of PDB 3pvv Chain B Binding Site BS02
Receptor Information
>3pvv Chain B (length=95) Species:
419947
(Mycobacterium tuberculosis H37Ra) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ISAATIMAATAEYFDTTVEELRGPGKTRALAQSRQIAMYLCRELTDLSLP
KIGQAFGRDHTTVMYAQRKILSEMAERREVFDHVKELTTRIRQRS
Ligand information
>3pvv Chain F (length=13) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gttgtggacaacg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3pvv
Structural and Thermodynamic Signatures of DNA Recognition by Mycobacterium tuberculosis DnaA.
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
G435 K436 T437 R438 S458 L459 P460 H470 M474
Binding residue
(residue number reindexed from 1)
G25 K26 T27 R28 S48 L49 P50 H60 M64
Binding affinity
PDBbind-CN
: Kd=36nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003688
DNA replication origin binding
GO:0005524
ATP binding
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006270
DNA replication initiation
GO:0006275
regulation of DNA replication
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3pvv
,
PDBe:3pvv
,
PDBj:3pvv
PDBsum
3pvv
PubMed
21620858
UniProt
A5TY69
|DNAA_MYCTA Chromosomal replication initiator protein DnaA (Gene Name=dnaA)
[
Back to BioLiP
]