Structure of PDB 3ppe Chain B Binding Site BS02

Receptor Information
>3ppe Chain B (length=203) Species: 9031 (Gallus gallus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DWIWNRMHIREEIDSPLPHHVGKLTSSVGNKNAMYIIEGESANTIFKVQG
YDGDIYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDN
APIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN
EYFTVDDSGVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIR
LTD
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain3ppe Chain B Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3ppe Structure and binding mechanism of vascular endothelial cadherin: a divergent classical cadherin.
Resolution2.1 Å
Binding residue
(original residue number in PDB)		N98 N100 D130 D132 H139 D184
Binding residue
(residue number reindexed from 1)		N98 N100 D130 D132 H139 D184
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0007155 cell adhesion
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
GO:0098609 cell-cell adhesion
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3ppe, PDBe:3ppe, PDBj:3ppe
PDBsum3ppe
PubMed21269602
UniProtQ8AYD0|CADH5_CHICK Cadherin-5 (Gene Name=CDH5)

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