Structure of PDB 3o72 Chain B Binding Site BS02
Receptor Information
>3o72 Chain B (length=375) Species:
544404
(Escherichia coli O157:H7 str. TW14359) [
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VARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQR
FAFLTQGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERF
GLAPQMPKKLQKMTRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDII
KHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANPDSQNDKL
MQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRD
KQTGAPLGMQHEHDVPDYASDPEGKGIALDSHIRLANPRTAESESSLMLR
RGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKP
IGGGYFFALPGVKDANDYLGSALLR
Ligand information
Ligand ID
OXY
InChI
InChI=1S/O2/c1-2
InChIKey
MYMOFIZGZYHOMD-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
OpenEye OEToolkits 1.5.0
O=O
Formula
O2
Name
OXYGEN MOLECULE
ChEMBL
CHEMBL1234886
DrugBank
DB09140
ZINC
PDB chain
3o72 Chain B Residue 600 [
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Receptor-Ligand Complex Structure
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PDB
3o72
Crystal structure and biochemical features of EfeB/YcdB from Escherichia coli O157: ASP235 plays divergent roles in different enzyme-catalyzed processes
Resolution
1.95 Å
Binding residue
(original residue number in PDB)
D235 R347
Binding residue
(residue number reindexed from 1)
D188 R300
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.11.1.-
4.98.1.1
: protoporphyrin ferrochelatase.
Gene Ontology
Molecular Function
GO:0004325
ferrochelatase activity
GO:0004601
peroxidase activity
GO:0016829
lyase activity
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0033212
iron import into cell
GO:0098869
cellular oxidant detoxification
Cellular Component
GO:0005829
cytosol
GO:0042597
periplasmic space
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:3o72
,
PDBe:3o72
,
PDBj:3o72
PDBsum
3o72
PubMed
21324904
UniProt
Q8XAS4
|EFEB_ECO57 Deferrochelatase (Gene Name=efeB)
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