Structure of PDB 3n0i Chain B Binding Site BS02

Receptor Information
>3n0i Chain B (length=185) Species: 52275 (Human adenovirus D37) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YDTRTLWTTPDTSPNCTIAQDKDSKLTLVLTKCGSQILANVSLIVVAGKY
HIINNKTNPKIKSFTIKLLFNKNGVLLDNSNLGKAYWNFRSGNSNVSTAY
EKAIGFMPNLVAYPKPSNSKKYARDIVYGTIYLGGKPDQPAVIKTTFNQE
TGCEYSITFNFSWSKTYENVEFETTSFTFSYIAQE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain3n0i Chain B Residue 10 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3n0i The GD1a glycan is a cellular receptor for adenoviruses causing epidemic keratoconjunctivitis.
Resolution1.65 Å
Binding residue
(original residue number in PDB)
H231 E351
Binding residue
(residue number reindexed from 1)
H51 E171
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0007155 cell adhesion
GO:0019058 viral life cycle
GO:0019062 virion attachment to host cell
Cellular Component
GO:0019028 viral capsid

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Biological Process

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Cellular Component
External links
PDB RCSB:3n0i, PDBe:3n0i, PDBj:3n0i
PDBsum3n0i
PubMed21151139
UniProtQ64823

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