Structure of PDB 3mmw Chain B Binding Site BS02

Receptor Information

>3mmw Chain B (length=309) Species: 2336 (Thermotoga maritima)

VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRI
PIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMN
DPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEE
ALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFE
FTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIG
EFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTW
NKDLLEALI

Ligand information

• Ligand ID: CD
• InChI: InChI=1S/Cd/q+2
• InChIKey: WLZRMCYVCSSEQC-UHFFFAOYSA-N
• SMILES:
  CACTVS 3.341: [Cd++]
  ACDLabs 10.04
  OpenEye OEToolkits 1.5.0: [Cd+2]
• Formula: Cd
• Name: CADMIUM ION
• PDB chain: 3mmw Chain B Residue 319

Receptor-Ligand Complex Structure

Structure summary

• PDB: 3mmw Biochemical characterization and crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima.
• Resolution: 1.85 Å
• Binding residue (original residue number in PDB): E136 E253
• Binding residue (residue number reindexed from 1): E134 E251
• Annotation score: 3

Gene Ontology

Molecular Function

• GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
• GO:0008422 beta-glucosidase activity
• GO:0016798 hydrolase activity, acting on glycosyl bonds

Biological Process

• GO:0000272 polysaccharide catabolic process
• GO:0005975 carbohydrate metabolic process
• GO:0009251 glucan catabolic process

Cellular Component

• GO:0005576 extracellular region
• GO:0009986 cell surface

External links

• PDB: RCSB:3mmw, PDBe:3mmw, PDBj:3mmw
• PDBsum: 3mmw
• PubMed: 20599513
• UniProt: Q9X273