Structure of PDB 3lgn Chain B Binding Site BS02
Receptor Information
>3lgn Chain B (length=109) Species:
158879
(Staphylococcus aureus subsp. aureus N315) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
HMFMAENRLQLQKGSAEETIERFYNRQGIETIEGFQQMFVTKTLNTEDTD
EVKILTIWESEDSFNNWLNSDVFKEAHKNVRLKSDDDGQQSPILSNKVFK
YDIGYHYQK
Ligand information
Ligand ID
OXY
InChI
InChI=1S/O2/c1-2
InChIKey
MYMOFIZGZYHOMD-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
OpenEye OEToolkits 1.5.0
O=O
Formula
O2
Name
OXYGEN MOLECULE
ChEMBL
CHEMBL1234886
DrugBank
DB09140
ZINC
PDB chain
3lgn Chain B Residue 109 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3lgn
The IsdG-family of haem oxygenases degrades haem to a novel chromophore
Resolution
1.5 Å
Binding residue
(original residue number in PDB)
N6 F22 I53
Binding residue
(residue number reindexed from 1)
N7 F23 I54
Annotation score
5
Enzymatic activity
Enzyme Commision number
1.14.99.48
: heme oxygenase (staphylobilin-producing).
Gene Ontology
Molecular Function
GO:0004392
heme oxygenase (decyclizing) activity
GO:0004497
monooxygenase activity
GO:0005506
iron ion binding
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0033212
iron import into cell
GO:0042167
heme catabolic process
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3lgn
,
PDBe:3lgn
,
PDBj:3lgn
PDBsum
3lgn
PubMed
20180905
UniProt
Q7A827
|HDOX2_STAAN Heme oxygenase (staphylobilin-producing) 2 (Gene Name=isdI)
[
Back to BioLiP
]