Structure of PDB 3kmp Chain B Binding Site BS02
Receptor Information
>3kmp Chain B (length=123) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
TSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPG
QPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECC
EFPFGSKQKEVCINPYHYKRVES
Ligand information
>3kmp Chain D (length=15) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gtatgtctagactga
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3kmp
Structure of Smad1 MH1/DNA complex reveals distinctive rearrangements of BMP and TGF-beta effectors.
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
L71 L75 Q76 K81
Binding residue
(residue number reindexed from 1)
L62 L66 Q67 K72
Binding affinity
PDBbind-CN
: Kd=111.9nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0006355
regulation of DNA-templated transcription
Cellular Component
GO:0005667
transcription regulator complex
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3kmp
,
PDBe:3kmp
,
PDBj:3kmp
PDBsum
3kmp
PubMed
20147459
UniProt
P70340
|SMAD1_MOUSE Mothers against decapentaplegic homolog 1 (Gene Name=Smad1)
[
Back to BioLiP
]