Structure of PDB 3il2 Chain B Binding Site BS02
Receptor Information
>3il2 Chain B (length=206) Species:
262724
(Thermus thermophilus HB27) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MKVPEAAISRLITYLRILEELEAQGVHRTSSEQLGELAQVTAFQVRKDLS
YFGSYGTRGVGYTVPVLKRELRHILGLNRKWGLCIVGMGDLGSALADYPG
FGESFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPR
EAAQKAADLLVAAGIKGILNFAPVVLEVPKEVAVENVDFLAGLTRLSFAI
LNPKWR
Ligand information
>3il2 Chain D (length=22) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cgcugugaacgcguucacagcg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3il2
Structural basis for NADH/NAD+ redox sensing by a Rex family repressor.
Resolution
2.49 Å
Binding residue
(original residue number in PDB)
S30 S31 R46 K47 S54 T57 R58 G59 V60 G61 Y62
Binding residue
(residue number reindexed from 1)
S30 S31 R46 K47 S54 T57 R58 G59 V60 G61 Y62
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0045892
negative regulation of DNA-templated transcription
GO:0051775
response to redox state
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3il2
,
PDBe:3il2
,
PDBj:3il2
PDBsum
3il2
PubMed
20513431
UniProt
Q72I39
|REX_THET2 Redox-sensing transcriptional repressor Rex (Gene Name=rex)
[
Back to BioLiP
]