Structure of PDB 3gri Chain B Binding Site BS02
Receptor Information
>3gri Chain B (length=423) Species:
196620
(Staphylococcus aureus subsp. aureus MW2) [
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MKLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFV
SPGFVDVHVHLREPGGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSV
EHFEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALVKEGAFAFTDD
GVGVQTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGI
PGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKESVRVIRDAKRAGIHV
TAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTIDCI
ATDHAPHARDEKAQPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVD
YLTIKPCETFNLEYGTLKENGYADLTIIDLDSEQEIKGEDFLSKADNTPF
IGYKVYGNPILTMVEGEVKFEGD
Ligand information
Ligand ID
CA
InChI
InChI=1S/Ca/q+2
InChIKey
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
Formula
Ca
Name
CALCIUM ION
ChEMBL
DrugBank
DB14577
ZINC
PDB chain
3gri Chain B Residue 700 [
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Receptor-Ligand Complex Structure
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PDB
3gri
The Crystal Structure of a Dihydroorotase from Staphylococcus aureus
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
F391 S393
Binding residue
(residue number reindexed from 1)
F391 S393
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.5.2.3
: dihydroorotase.
Gene Ontology
Molecular Function
GO:0004038
allantoinase activity
GO:0004151
dihydroorotase activity
GO:0008270
zinc ion binding
GO:0016787
hydrolase activity
GO:0016810
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0046872
metal ion binding
Biological Process
GO:0006145
purine nucleobase catabolic process
GO:0006221
pyrimidine nucleotide biosynthetic process
GO:0044205
'de novo' UMP biosynthetic process
Cellular Component
GO:0005737
cytoplasm
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:3gri
,
PDBe:3gri
,
PDBj:3gri
PDBsum
3gri
PubMed
UniProt
P65907
|PYRC_STAAW Dihydroorotase (Gene Name=pyrC)
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