Structure of PDB 3gmc Chain B Binding Site BS02
Receptor Information
>3gmc Chain B (length=369) Species:
381
(Mesorhizobium loti) [
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TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGL
RVLEGLGALDDVLQGSHTPPTYETWMHNKSVSKETFNGLPWRIMTRSHLH
DALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGS
KVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQ
RILYSPCNENELYLGLMAPAADPRGSSVPIDLEVWVEMFPFLEPCLIEAA
KLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFS
LSQDLEEGSSVEDALVAWETRIRPITDRCQALSGDYAANRSLSKGNMFTP
AALEAARYDPLRRVYSWPQ
Ligand information
Ligand ID
3HM
InChI
InChI=1S/C7H7NO3/c1-4-6(9)2-5(3-8-4)7(10)11/h2-3,9H,1H3,(H,10,11)
InChIKey
NYEFWJFPBFRRKU-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
Cc1c(cc(cn1)C(=O)O)O
CACTVS 3.341
Cc1ncc(cc1O)C(O)=O
ACDLabs 10.04
O=C(O)c1cnc(c(O)c1)C
Formula
C7 H7 N O3
Name
5-hydroxy-6-methylpyridine-3-carboxylic acid;
2-methyl-3-hydroxypyridine-5-carboxylic acid
ChEMBL
DrugBank
ZINC
ZINC000000895555
PDB chain
3gmc Chain B Residue 381 [
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Receptor-Ligand Complex Structure
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PDB
3gmc
Structure of the PLP degradative enzyme 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase from Mesorhizobium loti MAFF303099 and its mechanistic implications.
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
Y54 R211 L213 P295 A296
Binding residue
(residue number reindexed from 1)
Y44 R201 L203 P285 A286
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0004497
monooxygenase activity
GO:0071949
FAD binding
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Molecular Function
External links
PDB
RCSB:3gmc
,
PDBe:3gmc
,
PDBj:3gmc
PDBsum
3gmc
PubMed
19317437
UniProt
Q988D3
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