Structure of PDB 3ewj Chain B Binding Site BS02

Receptor Information
>3ewj Chain B (length=255) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PMKNTCKLLVVADHRFYRYMGRGEESTTTNYLIELIDRVDDIYRNTAWDN
AGFKGYGIQIEQIRILKSPQEVKPGEKHYNMAKSYPNEEKDAWDVKMLLE
QFSFDIAEEASKVCLAHLFTYQDFDMGTLGLAYGGSPRANSHGGVCPKAY
YSPVGKKNIYLNSGLTSTKNYGKTILTKEADLVTTHELGHNFGAEHDPDG
LAECAPNEDQGGKYVMYPIAVSGDHENNKMFSQCSKQSIYKTIESKAQEC
FQERS
Ligand information
Ligand ID642
InChIInChI=1S/C29H24N2O4/c32-27(33)23-15-29(23)16-26(31-28(29)34)19-10-12-21(13-11-19)35-17-20-14-25(18-6-2-1-3-7-18)30-24-9-5-4-8-22(20)24/h1-14,23,26H,15-17H2,(H,31,34)(H,32,33)/t23-,26+,29-/m1/s1
InChIKeyBFZXMIUWGSTUAL-ZSOKXDGFSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04O=C5NC(c4ccc(OCc2c3ccccc3nc(c1ccccc1)c2)cc4)CC56C(C(=O)O)C6
CACTVS 3.341OC(=O)[C@H]1C[C@@]12C[C@H](NC2=O)c3ccc(OCc4cc(nc5ccccc45)c6ccccc6)cc3
OpenEye OEToolkits 1.5.0c1ccc(cc1)c2cc(c3ccccc3n2)COc4ccc(cc4)[C@@H]5C[C@@]6(C[C@@H]6C(=O)O)C(=O)N5
OpenEye OEToolkits 1.5.0c1ccc(cc1)c2cc(c3ccccc3n2)COc4ccc(cc4)C5CC6(CC6C(=O)O)C(=O)N5
CACTVS 3.341OC(=O)[CH]1C[C]12C[CH](NC2=O)c3ccc(OCc4cc(nc5ccccc45)c6ccccc6)cc3
FormulaC29 H24 N2 O4
Name(1S,3R,6S)-4-oxo-6-{4-[(2-phenylquinolin-4-yl)methoxy]phenyl}-5-azaspiro[2.4]heptane-1-carboxylic acid
ChEMBL
DrugBankDB07189
ZINCZINC000040891582
PDB chain3ewj Chain B Residue 1 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3ewj Discovery of novel spirocyclopropyl hydroxamate and carboxylate compounds as TACE inhibitors.
Resolution1.8 Å
Binding residue
(original residue number in PDB)
T347 L348 E398 L401 H405 E406 H409 H415 Y433 Y436 P437 I438 A439 V440 G442 N447
Binding residue
(residue number reindexed from 1)
T128 L129 E179 L182 H186 E187 H190 H196 Y214 Y217 P218 I219 A220 V221 G223 N228
Annotation score1
Binding affinityMOAD: Ki=143nM
Enzymatic activity
Enzyme Commision number 3.4.24.86: ADAM 17 endopeptidase.
Gene Ontology
Molecular Function
GO:0004222 metalloendopeptidase activity
GO:0008237 metallopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function

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Biological Process
External links
PDB RCSB:3ewj, PDBe:3ewj, PDBj:3ewj
PDBsum3ewj
PubMed19054672
UniProtP78536|ADA17_HUMAN Disintegrin and metalloproteinase domain-containing protein 17 (Gene Name=ADAM17)

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