Structure of PDB 3c9i Chain B Binding Site BS02

Receptor Information
>3c9i Chain B (length=242) Species: 10754 (Lederbergvirus P22) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GALVPRGSHMADPSLNNPVVIQATRLDASILPRNVFSKSYLLYVIAQGTD
VGAIAGKANEAGQGAYDAQVKNDEQDVELADHEARIKQLRIDVDDHESRI
TANTKAITALNVRVTTAEGEIASLQTNVSALDGRVTTAENNISALQADYV
SKTATTSQSLASPLNVTTSYSVGGKKVVGARQTGWTAATGTANKGVFDAD
LTFAVSDTYTQSEIQAIANALITERRRTKAMEDALRAHGLID
Ligand information
Ligand IDXE
InChIInChI=1S/Xe
InChIKeyFHNFHKCVQCLJFQ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[Xe]
FormulaXe
NameXENON
ChEMBLCHEMBL1236802
DrugBankDB13453
ZINC
PDB chain3c9i Chain C Residue 4 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3c9i Structural plasticity of the phage P22 tail needle gp26 probed with xenon gas.
Resolution1.95 Å
Binding residue
(original residue number in PDB)		L1136 Y1140
Binding residue
(residue number reindexed from 1)		L145 Y149
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0044694 symbiont genome entry into host cell via pore formation in plasma membrane
GO:0046718 symbiont entry into host cell
GO:0099002 symbiont genome ejection through host cell envelope, short tail mechanism
Cellular Component
GO:0098015 virus tail

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3c9i, PDBe:3c9i, PDBj:3c9i
PDBsum3c9i
PubMed19241380
UniProtP35837|NEEDL_BPP22 Tail needle protein gp26 (Gene Name=26)

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