Structure of PDB 2yww Chain B Binding Site BS02

Receptor Information
>2yww Chain B (length=142) Species: 2190 (Methanocaldococcus jannaschii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KVKKITNGTVIDHIDAGKALMVFKVLNVPKETSVMIAINVPSKKKGKKDI
LKIEGIELKKEDVDKISLISPDVTINIIRNGKVVEKLKPQIPDEIEGTLK
CTNPNCITNKEKVRGKFKIESKNPLKIRCYYCEKFLNEVIFE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain2yww Chain B Residue 503 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2yww Crystal structure of aspartate carbamoyltransferase regulatory chain from Methanocaldococcus jannaschii
Resolution2.0 Å
Binding residue
(original residue number in PDB)
C108 C113 C136 C139
Binding residue
(residue number reindexed from 1)
C101 C106 C129 C132
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 pyrimidine nucleotide biosynthetic process
Cellular Component
GO:0009347 aspartate carbamoyltransferase complex

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Cellular Component
External links
PDB RCSB:2yww, PDBe:2yww, PDBj:2yww
PDBsum2yww
PubMed
UniProtQ58801|PYRI_METJA Aspartate carbamoyltransferase regulatory chain (Gene Name=pyrI)

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