Structure of PDB 2xnj Chain B Binding Site BS02
Receptor Information
>2xnj Chain B (length=250) Species:
562
(Escherichia coli) [
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ADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEIDGERVQRA
YSYVNSPDNPDLEFYLVTVVYTNDAGEVVKGKLSPRLAALKPGDEVQVVS
EAAGFFVLDEVPHCETLWMLATGTAIGPYLSILRLGKDLDRFKNLVLVHA
ARYAADLSYLPLMQELEKRYEGKLRIQTVVSRETAAGSLTGRIPALIESG
ELESTIGLPMNKETSHVMLCGNPQMVRDTQQLLKETRQMTKHGHMTAEHY
Ligand information
Ligand ID
NAP
InChI
InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
XJLXINKUBYWONI-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Formula
C21 H28 N7 O17 P3
Name
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE;
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
ChEMBL
CHEMBL295069
DrugBank
DB03461
ZINC
PDB chain
2xnj Chain B Residue 1258 [
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Receptor-Ligand Complex Structure
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PDB
2xnj
Swapping Fad Binding Motifs between Plastidic and Bacterial Ferredoxin-Nadp(H) Reductases.
Resolution
1.9 Å
Binding residue
(original residue number in PDB)
A18 L19 V68 T69 V70 V71 T123 A152 R153 D157 S182 R183 R193 P195 N223 Q225 M226 D229
Binding residue
(residue number reindexed from 1)
A17 L18 V67 T68 V69 V70 T122 A151 R152 D156 S181 R182 R192 P194 N222 Q224 M225 D228
Annotation score
4
Binding affinity
MOAD
: Kd=7.5uM
Enzymatic activity
Catalytic site (original residue number in PDB)
F36 Y52 S53 C221 E254 Y256
Catalytic site (residue number reindexed from 1)
F35 Y51 S52 C220 E248 Y250
Enzyme Commision number
1.18.1.2
: ferredoxin--NADP(+) reductase.
1.19.1.1
: flavodoxin--NADP(+) reductase.
Gene Ontology
Molecular Function
GO:0004324
ferredoxin-NADP+ reductase activity
GO:0016491
oxidoreductase activity
View graph for
Molecular Function
External links
PDB
RCSB:2xnj
,
PDBe:2xnj
,
PDBj:2xnj
PDBsum
2xnj
PubMed
21306142
UniProt
P28861
|FENR_ECOLI Flavodoxin/ferredoxin--NADP reductase (Gene Name=fpr)
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