Structure of PDB 2wu5 Chain B Binding Site BS02
Receptor Information
>2wu5 Chain B (length=238) Species:
562
(Escherichia coli) [
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MRLEFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKEKDPSLS
FRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVI
RDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECI
LCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDA
FSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA
Ligand information
Ligand ID
SF4
InChI
InChI=1S/4Fe.4S
InChIKey
LJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385
S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
Formula
Fe4 S4
Name
IRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
2wu5 Chain B Residue 303 [
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Receptor-Ligand Complex Structure
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PDB
2wu5
Crystal Structure of the E. Coli Succinate:Quinone Oxidoreductase (Sqr) Sdhd His71met Mutant
Resolution
2.803 Å
Binding residue
(original residue number in PDB)
C149 I150 L151 C152 A153 C155 A173 C216 L220
Binding residue
(residue number reindexed from 1)
C149 I150 L151 C152 A153 C155 A173 C216 L220
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.3.5.1
: succinate dehydrogenase.
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0008177
succinate dehydrogenase (quinone) activity
GO:0009055
electron transfer activity
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051536
iron-sulfur cluster binding
GO:0051537
2 iron, 2 sulfur cluster binding
GO:0051538
3 iron, 4 sulfur cluster binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0006099
tricarboxylic acid cycle
GO:0009060
aerobic respiration
GO:0019646
aerobic electron transport chain
GO:0022904
respiratory electron transport chain
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:2wu5
,
PDBe:2wu5
,
PDBj:2wu5
PDBsum
2wu5
PubMed
UniProt
P07014
|SDHB_ECOLI Succinate dehydrogenase iron-sulfur subunit (Gene Name=sdhB)
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