Structure of PDB 2vju Chain B Binding Site BS02

Receptor Information

>2vju Chain B (length=135) Species: 210 (Helicobacter pylori) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SAMASNAVLYKSNHNVVYSCKYHIVWCPKYRRKVLVGAVEMRLKEIIQEV
AKELRVEIIEMQTDKDHIHILADIDPSFGVMKFIKTAKGRSSRILRQEFN
HLKTKLPTLWTNSCFISTVGGAPLNVVKQYIENQQ

Ligand information

>2vju Chain D (length=35) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

gaatcccctagctttagctatggggagtatgtcaa

Receptor-Ligand Complex Structure

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PDB	2vju Mechanism of is200/is605 Family DNA Transposases: Activation and Transposon-Directed Target Site Selection.
Resolution	2.4 Å
Binding residue (original residue number in PDB)	C24 K26 Y27 R28 H64 H66 M78 T83 K85 G86 R87 S89 R90 R93 T105 W107 T108 N109 S110
Binding residue (residue number reindexed from 1)	C27 K29 Y30 R31 H67 H69 M81 T86 K88 G89 R90 S92 R93 R96 T108 W110 T111 N112 S113

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003677	DNA binding
GO:0004803	transposase activity
GO:0046872	metal ion binding

	Biological Process
GO:0006313	DNA transposition

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Biological Process

External links

PDB	RCSB:2vju, PDBe:2vju, PDBj:2vju
PDBsum	2vju
PubMed	18243097
UniProt	Q933Z0

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