Structure of PDB 2vic Chain B Binding Site BS02

Receptor Information

>2vic Chain B (length=128) Species: 210 (Helicobacter pylori) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

VLYKSNHNVVYSCKYHIVWCPKYRRKVLVGAVEMRLKEIIQEVAKELRVE
IIEMQTDKDHIHILADIDPSFGVMKFIKTAKGRSSRILRQEFNHLKTKLP
TLWTNSCFISTVGGAPLNVVKQYIENQQ

Ligand information

>2vic Chain D (length=26) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

aaagcccctagcttttagctatgggg

Receptor-Ligand Complex Structure

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PDB	2vic Mechanism of is200/is605 Family DNA Transposases: Activation and Transposon-Directed Target Site Selection.
Resolution	2.35 Å
Binding residue (original residue number in PDB)	K26 Y27 M78 K82 K85 G86 R87 S89 R90 R93 T105 W107 T108 N109 S110
Binding residue (residue number reindexed from 1)	K22 Y23 M74 K78 K81 G82 R83 S85 R86 R89 T101 W103 T104 N105 S106

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003677	DNA binding
GO:0004803	transposase activity
GO:0046872	metal ion binding

	Biological Process
GO:0006313	DNA transposition

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Molecular Function

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Biological Process

External links

PDB	RCSB:2vic, PDBe:2vic, PDBj:2vic
PDBsum	2vic
PubMed	18243097
UniProt	Q933Z0

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