Structure of PDB 2rve Chain B Binding Site BS02

Receptor Information

>2rve Chain B (length=212) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SLRSDLINALYVCGIISAEGKIYPLGSDTKVLSTIFELFSRPIINKIAEK
HGYIVEEPKQQNHYPDFTLYKPSEPNKKIAIDIKTTYTNKENEKIKFTLG
GYTSFIRNNTKNIVYPFDQYIAHWIIGYVYTRTYNINELNEIPKPYKGVK
VFLQDKWVIAGDLAGSTNIGSIHAHYKDFVEGKGIFDSEDEFLDYWRNYE
YNNISEYRNWIY

Ligand information

>2rve Chain D (length=8) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

cgagctcg

Receptor-Ligand Complex Structure

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Structure summary

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PDB	2rve The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments.
Resolution	3.0 Å
Binding residue (original residue number in PDB)	S112 K119 N120
Binding residue (residue number reindexed from 1)	S104 K111 N112

Enzymatic activity

Enzyme Commision number

3.1.21.4: type II site-specific deoxyribonuclease.

Gene Ontology

	Molecular Function
GO:0003677	DNA binding
GO:0004519	endonuclease activity
GO:0009036	type II site-specific deoxyribonuclease activity
GO:0046872	metal ion binding

	Biological Process
GO:0009307	DNA restriction-modification system

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External links

PDB	RCSB:2rve, PDBe:2rve, PDBj:2rve
PDBsum	2rve
PubMed	8491171
UniProt	P04390\|T2E5_ECOLX Type II restriction enzyme EcoRV (Gene Name=ecoRVR)

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