Structure of PDB 2rg9 Chain B Binding Site BS02

Receptor Information
>2rg9 Chain B (length=263) Species: 3972 (Viscum album) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DDVTCSASEPIVRIVGRNGMTVDVRDDDFQDGNQIQLWPSKSNNDPNQLW
TIKKDGTIRSNGSCLTTYGYTAGVYVMIFDCNTAVREATIWQIWGNGTII
NPRSNLVLAASSGIKGTTLTVQTLDYTLGQGWLAGNDTAPREVTIYGFRD
LCMESNGGSVWVETCTIGQENQRWALYGDGSIRPKQNQSQCLTNGRDSVS
TVINIVSCSAGSSGQRWVFTNEGAILNLKNGLAMDVAQANPKLRRIIIYP
ATGNPNQMWLPVP
Ligand information
Ligand IDAZI
InChIInChI=1S/N3/c1-3-2/q-1
InChIKeyIVRMZWNICZWHMI-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[N-]=[N+]=[N-]
FormulaN3
NameAZIDE ION
ChEMBLCHEMBL79455
DrugBank
ZINC
PDB chain2rg9 Chain B Residue 4003 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2rg9 Crystal structure of viscum album mistletoe lectin I in native state at 1.95 A resolution, comparison of structure active site conformation in ricin and in viscumin
Resolution1.95 Å
Binding residue
(original residue number in PDB)
Q30 D31
Binding residue
(residue number reindexed from 1)
Q30 D31
Annotation score1
Enzymatic activity
Enzyme Commision number 3.2.2.22: rRNA N-glycosylase.
External links
PDB RCSB:2rg9, PDBe:2rg9, PDBj:2rg9
PDBsum2rg9
PubMed
UniProtP81446|ML1_VISAL Beta-galactoside-specific lectin 1

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