Structure of PDB 2qtk Chain B Binding Site BS02

Receptor Information

>2qtk Chain B (length=368) Species: 208964 (Pseudomonas aeruginosa PAO1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

FLEDAKTDLVLRNYYFNRDFLVDEWAQGFILKFSSGYTPGTVGVGLDAIG
LFGVKLNNSELLPLHAADNYGRVGVAAKLRVSASELKIGEMLPDIPLLRY
DDGRLLPQTFRGFAVVSRELPGLALQAGRFDAVSLRNSADMQDLSAWSAP
TQKSDGFNYAGAEYRFNRERTQLGLWHGQLEDVYRQSYANLLHKQRVGDW
TLGANLGLFVDRDDGAARAGEIDSHTVYGLFSAGIGLHTFYLGLQKVGGD
SGWQSVYGSSGRSMGNDMFNGNFTNADERSWQVRYDYDFVGLGWPGLIGM
VRYGHGSNATTKAGSGGKEWERDVELGYTVQSGPLARLNVRLNHASNRRS
FNSDFDQTRLVVSYPLSW

Ligand information

Ligand ID

C8E

InChI

InChI=1S/C16H34O5/c1-2-3-4-5-6-7-9-18-11-13-20-15-16-21-14-12-19-10-8-17/h17H,2-16H2,1H3

InChIKey

FEOZZFHAVXYAMB-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04	O(CCCCCCCC)CCOCCOCCOCCO
CACTVS 3.341 OpenEye OEToolkits 1.5.0	CCCCCCCCOCCOCCOCCOCCO

Formula

C16 H34 O5

Name

(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE

PDB chain

2qtk Chain B Residue 392 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	2qtk Crystal Structure of the Outer Membrane Protein OpdK from Pseudomonas aeruginosa.
Resolution	2.8 Å
Binding residue (original residue number in PDB)	M322 V346
Binding residue (residue number reindexed from 1)	M300 V324
Annotation score	1

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0015288	porin activity

	Biological Process
GO:0055085	transmembrane transport

	Cellular Component
GO:0016020	membrane

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:2qtk, PDBe:2qtk, PDBj:2qtk
PDBsum	2qtk
PubMed	18611376
UniProt	Q9HUR5

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