Structure of PDB 2q7a Chain B Binding Site BS02
Receptor Information
>2q7a Chain B (length=152) Species:
1314
(Streptococcus pyogenes) [
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MDKGQIYGSIIQRNYRHPISGQIEDSGGEHSFDIGQGMVEGTVYSDAMLE
VSDAGKIVLTFRMSLADYSGNYQFWIQPGGTGSFQAVDYNITQKGTDTNG
TTLDIAISLPTVNSIIRGSMFVEPMGREVVFYLSASELIQKYSGNMLAQL
VT
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
2q7a Chain B Residue 181 [
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Receptor-Ligand Complex Structure
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PDB
2q7a
Bis-methionyl coordination in the crystal structure of the heme-binding domain of the streptococcal cell surface protein Shp.
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
Y43 I62 M66 V67 T70 L93 V150 M153 R155 V157
Binding residue
(residue number reindexed from 1)
Y15 I34 M38 V39 T42 L65 V122 M125 R127 V129
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0020037
heme binding
View graph for
Molecular Function
External links
PDB
RCSB:2q7a
,
PDBe:2q7a
,
PDBj:2q7a
PDBsum
2q7a
PubMed
17920629
UniProt
Q06A48
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