Structure of PDB 2pyo Chain B Binding Site BS02
Receptor Information
>2pyo Chain B (length=80) Species:
7227
(Drosophila melanogaster) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTY
TEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Ligand information
>2pyo Chain J (length=147) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
atcaatatccacctgcagatactaccaaaagtgtatttggaaactgctcc
atcaaaaggcatgttcagctggattccagctgaacatgccttttgatgga
gcagtttccaaatacacttttggtagtatctgcaggtggatattgat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2pyo
Structure of the Drosophila nucleosome core particle highlights evolutionary constraints on the H2A-H2B histone dimer.
Resolution
2.43 Å
Binding residue
(original residue number in PDB)
R35 R45 I46 S47 G48 R78 K79 T80
Binding residue
(residue number reindexed from 1)
R13 R23 I24 S25 G26 R56 K57 T58
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003676
nucleic acid binding
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0030527
structural constituent of chromatin
GO:0046982
protein heterodimerization activity
Biological Process
GO:0006334
nucleosome assembly
Cellular Component
GO:0000228
nuclear chromosome
GO:0000786
nucleosome
GO:0005634
nucleus
GO:0005694
chromosome
GO:0035059
RCAF complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:2pyo
,
PDBe:2pyo
,
PDBj:2pyo
PDBsum
2pyo
PubMed
17957772
UniProt
P84040
|H4_DROME Histone H4 (Gene Name=His4)
[
Back to BioLiP
]