Structure of PDB 2d5f Chain B Binding Site BS02

Receptor Information
>2d5f Chain B (length=385) Species: 3847 (Glycine max) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NECQLNNLNALEPDHRVESEGGLIETWNSQHPELQCAGVTVSKRTLNRNG
LHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQLQDSHQKIRHFN
EGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGN
PDIEHPETMQEGGSVLSGFSKHFLAQSFNTNEDTAEKLRSPDDERKQIVT
VEGGLSVISPKWGVEENICTMKLHENIARPSRADFYNPKAGRISTLNSLT
LPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNCQG
NAVFDGELRRGQLLVVPQNFVVAEQGGEQGLEYVVFKTHHNAVSSYIKDV
FRAIPSEVLSNSYNLGQSQVRQLKYQGNSGPLVNP
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain2d5f Chain B Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2d5f Conservation and divergence on plant seed 11S globulins based on crystal structures.
Resolution1.9 Å
Binding residue
(original residue number in PDB)		H383 E432
Binding residue
(residue number reindexed from 1)		H275 E324
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0045735 nutrient reservoir activity

View graph for
Molecular Function
External links
PDB RCSB:2d5f, PDBe:2d5f, PDBj:2d5f
PDBsum2d5f
PubMed20215054
UniProtP04347|GLYG5_SOYBN Glycinin G5 (Gene Name=GY5)

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