Structure of PDB 2ckr Chain B Binding Site BS02
Receptor Information
>2ckr Chain B (length=305) Species:
2021
(Thermobifida fusca) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GTPVERYGKVQVCGTQLCDEHGNPVQLRGMSTHGIQWFDHCLTDSSLDAL
AYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARGLYVIVDWH
ILTPGDPHYNLDRAKTFFAEIAQRHASKTNVLYEIANEPNGVSWASIKSY
AEEVIPVIRQRDPDSVIIVGTRGWSSLGVSEGSGPAEIAANPVNASNIMY
AFHFYAASHRDNYLNALREASELFPVFVTQFGTETYTGDGANDFQMADRY
IDLMAERKIGWTKWNYSDDFRSGAVFQPGTCASGGPWSGSSLKASGQWVR
SKLQS
Ligand information
Ligand ID
BGC
InChI
InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKey
WQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370
OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370
OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6
C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01
OC1C(O)C(OC(O)C1O)CO
Formula
C6 H12 O6
Name
beta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBL
CHEMBL1614854
DrugBank
DB02379
ZINC
ZINC000003833800
PDB chain
2ckr Chain C Residue 3 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2ckr
The Crystal Structure of the Catalytic Domain of Thermobifida Fusca Endoglucanase Cel5A in Complex with Cellotetraose
Resolution
1.77 Å
Binding residue
(original residue number in PDB)
E263 Y330 Q355
Binding residue
(residue number reindexed from 1)
E138 Y205 Q230
Annotation score
4
Enzymatic activity
Enzyme Commision number
3.2.1.4
: cellulase.
Gene Ontology
Molecular Function
GO:0004553
hydrolase activity, hydrolyzing O-glycosyl compounds
Biological Process
GO:0000272
polysaccharide catabolic process
GO:0005975
carbohydrate metabolic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:2ckr
,
PDBe:2ckr
,
PDBj:2ckr
PDBsum
2ckr
PubMed
UniProt
Q01786
|GUN5_THEFU Endoglucanase E-5 (Gene Name=celE)
[
Back to BioLiP
]