Structure of PDB 2bgg Chain B Binding Site BS02

Receptor Information
>2bgg Chain B (length=394) Species: 2234 (Archaeoglobus fulgidus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GLTYRIGNGASVPISNTGELIKGLRNYGPYEVPSLKYNQIALIHNSSLIN
QLKSQISSKIDEVWHIHNINISEFIYDSPHFDSIKSQVDNAIDTGVDGIM
LVLPEYNTPLYYKLKSYLINSIPSQFMRYDILSNRNLTFYVDNLLVQFVS
KLGGKPWILNVDPEKGSDIIIGTGATRIDNVNLFCFAMVFKKDGTMLWNE
ISPIVTSSEYLTYLKSTIKKVVYGFKKSNPDWDVEKLTLHVSGKRPKMKD
GETKILKETVEELKKQEMVSRDVKYAILHLNETHPFWVMGTKVKLSSKRY
LLTLLQVTPIKPLSVEIVSDNWTSEEYYHNVHEILDEIYYLSKMNWRGFR
SRNLPVTVNYPKLVAGIIANVNRYGGYPINPEGNRSLQTNPWFL
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain2bgg Chain B Residue 1428 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2bgg Structural Insights Into Mrna Recognition from a Piwi Domain-Sirna Guide Complex
Resolution2.2 Å
Binding residue
(original residue number in PDB)		Q159 L427
Binding residue
(residue number reindexed from 1)		Q147 L394
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:2bgg, PDBe:2bgg, PDBj:2bgg
PDBsum2bgg
PubMed15800628
UniProtO28951|PIWI_ARCFU Piwi protein (Gene Name=AF_1318)

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