Structure of PDB 2b8w Chain B Binding Site BS02
Receptor Information
>2b8w Chain B (length=290) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
HMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLM
NKLAGKKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVE
KGDNQNDSWIFALAVLLSSTFVYNSIGTINQQAMDQLYYVTELTHRIRSK
SSVSFFPDFVWTLRDFSLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETF
NLPRLCIRKFFPKKKCFVFDRPVHRRKLAQLEKLQDEELDPEFVQQVADF
CSYIFSNSKTKTLSGGIQVNGPRLESLVLTYVNAISSGDL
Ligand information
Ligand ID
ALF
InChI
InChI=1S/Al.4FH/h;4*1H/q+3;;;;/p-4
InChIKey
UYOMQIYKOOHAMK-UHFFFAOYSA-J
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
F[Al-](F)(F)F
Formula
Al F4
Name
TETRAFLUOROALUMINATE ION
ChEMBL
DrugBank
DB04444
ZINC
PDB chain
2b8w Chain B Residue 594 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2b8w
How guanylate-binding proteins achieve assembly-stimulated processive cleavage of GTP to GMP.
Resolution
2.22 Å
Binding residue
(original residue number in PDB)
Y47 R48 H74 T75 G100
Binding residue
(residue number reindexed from 1)
Y42 R43 H69 T70 G95
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.6.1.-
3.6.5.-
Gene Ontology
Molecular Function
GO:0003924
GTPase activity
GO:0005525
GTP binding
View graph for
Molecular Function
External links
PDB
RCSB:2b8w
,
PDBe:2b8w
,
PDBj:2b8w
PDBsum
2b8w
PubMed
16511497
UniProt
P32455
|GBP1_HUMAN Guanylate-binding protein 1 (Gene Name=GBP1)
[
Back to BioLiP
]