Structure of PDB 2a3v Chain B Binding Site BS02
Receptor Information
>2a3v Chain B (length=320) Species:
243277
(Vibrio cholerae O1 biovar El Tor str. N16961) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MGSQFLLSVREFMQTRYYAKKTIEAYLHWITRYIHFHNKKHPSLMGDKEV
EEFLTYLAVQGKVATKTQSLALNSLSFLYKEILKTPLSLEIRFQRSQLER
KLPVVLTRDEIRRLLEIVDPKHQLPIKLLYGSGLRLMECMRLRVQDIDFD
YGAIRIWQGKGGKNRTVTLAKELYPHLKEQIALAKRYYDRDLHQKNYGGV
WLPTALKEKYPNAPYEFRWHYLFPSFQLSLDPESDVMRRHHMNETVLQKA
VRRSAQEAGIEKTVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTTQ
IYTHVLDRGASGVLSPLSRL
Ligand information
>2a3v Chain F (length=34) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
tgacagtccctcttgaggcgtttgttataaccgg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2a3v
Structural basis for broad DNA-specificity in integron recombination.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
H28 W29 T31 H35 A64 K66 T67 L70 R100 K101 H122 R135 W201 S225 F226 S229 D231 P232 R238 H240 N243 T245 V246 K249
Binding residue
(residue number reindexed from 1)
H28 W29 T31 H35 A64 K66 T67 L70 R100 K101 H122 R135 W201 S225 F226 S229 D231 P232 R238 H240 N243 T245 V246 K249
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
Biological Process
GO:0006310
DNA recombination
GO:0015074
DNA integration
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:2a3v
,
PDBe:2a3v
,
PDBj:2a3v
PDBsum
2a3v
PubMed
16641988
UniProt
O68847
[
Back to BioLiP
]