Structure of PDB 1z5u Chain B Binding Site BS02
Receptor Information
>1z5u Chain B (length=210) [
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PSTLNPGTNVAKLAEQAPVHWVSVAQIENSLTGRPPMAVGFDIDDTVLFS
SPGFWRGKKTYSPDSDDYLKNPAFWEKMNNGWDEFSIPKEAARQLIDMHV
RRGDSIYFVTGRSQTKTETVSKTLADNFHIPAANMNPVIFAGDKPEQNTK
VQWLQEKNMRIFYGDSDNDITAARDCGIRGIRILRAANSTYKPLPQAGAF
GEEVIVNSEY
Ligand information
Ligand ID
CMP
InChI
InChI=1S/C10H12N5O6P/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7-4(20-10)1-19-22(17,18)21-7/h2-4,6-7,10,16H,1H2,(H,17,18)(H2,11,12,13)/t4-,6-,7-,10-/m1/s1
InChIKey
IVOMOUWHDPKRLL-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C4C(O3)COP(=O)(O4)O)O)N
ACDLabs 10.04
O=P3(OCC4OC(n1c2ncnc(N)c2nc1)C(O)C4O3)O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)CO[P@](=O)(O4)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH]4CO[P](O)(=O)O[CH]4[CH]3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@@H]4CO[P@](O)(=O)O[C@H]4[C@H]3O
Formula
C10 H12 N5 O6 P
Name
ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE;
CYCLIC AMP;
CAMP
ChEMBL
CHEMBL316966
DrugBank
DB02527
ZINC
ZINC000003873977
PDB chain
1z5u Chain B Residue 504 [
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Receptor-Ligand Complex Structure
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PDB
1z5u
Expression, purification, crystallization and preliminary X-ray diffraction studies of recombinant class B non-specific acid phosphatase of Salmonella typhimurium
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
F58 Y72 G115 T194 Y195
Binding residue
(residue number reindexed from 1)
F54 Y68 G111 T190 Y191
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.1.3.2
: acid phosphatase.
Gene Ontology
Molecular Function
GO:0003993
acid phosphatase activity
GO:0016787
hydrolase activity
GO:0046872
metal ion binding
Cellular Component
GO:0030288
outer membrane-bounded periplasmic space
GO:0042597
periplasmic space
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:1z5u
,
PDBe:1z5u
,
PDBj:1z5u
PDBsum
1z5u
PubMed
UniProt
Q540U1
|APHA_SALTM Class B acid phosphatase (Gene Name=aphA)
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