Structure of PDB 1tw8 Chain B Binding Site BS02
Receptor Information
>1tw8 Chain B (length=256) Species:
727
(Haemophilus influenzae) [
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SFIKPIYQDINSILIGQKVKRPKSGTLSGHAAGEPFEKLVYKFLKENLSD
LTFKQYEYLNDLFMKNPAIIGHEARYKLFNSPTLLFLLSRGKAATENWSI
ENLFEEKQNDTADILLVKDQFYELLDVKTRNISKSAQAPNIISAYKLAQT
CAKMIDNKEFDLFDINYLEVDWELNGEDLVCVSTSFAELFKSEPSELYIN
WAAAMQIQFHVRDLDQGFNGTREEWAKSYLKHFVTQAEQRAISMIDKFVK
PFKKYI
Ligand information
>1tw8 Chain F (length=13) [
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gccggtcgaccgg
Receptor-Ligand Complex Structure
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PDB
1tw8
Ca2+ binding in the active site of HincII: implications for the catalytic mechanism
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
Y77 S90 K93 K108 Q109 Q138 Y199 N201 A203 A204 R241 K248
Binding residue
(residue number reindexed from 1)
Y76 S89 K92 K107 Q108 Q137 Y198 N200 A202 A203 R240 K247
Binding affinity
PDBbind-CN
: Kd=1.14nM
Enzymatic activity
Enzyme Commision number
3.1.21.4
: type II site-specific deoxyribonuclease.
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0004519
endonuclease activity
GO:0009036
type II site-specific deoxyribonuclease activity
Biological Process
GO:0009307
DNA restriction-modification system
View graph for
Molecular Function
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Biological Process
External links
PDB
RCSB:1tw8
,
PDBe:1tw8
,
PDBj:1tw8
PDBsum
1tw8
PubMed
15491133
UniProt
P17743
|T2C2_HAEIF Type II restriction enzyme HincII (Gene Name=hincIIR)
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