Structure of PDB 1t3n Chain B Binding Site BS02
Receptor Information
>1t3n Chain B (length=388) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVK
KLMNVRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFD
ENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVG
SQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESC
QHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTFSPKILEKELGIS
VAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLA
SLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGN
YDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK
Ligand information
>1t3n Chain P (length=13) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gggggaaggaccc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1t3n
Replication by human DNA polymerase-iota occurs by Hoogsteen base-pairing.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
L543 E547 K627 G663 K665 R763 Y775 G776 R777 E778 S779 R780 Q781 P783
Binding residue
(residue number reindexed from 1)
L97 E101 K181 G217 K219 R317 Y329 G330 R331 E332 S333 R334 Q335 P337
Enzymatic activity
Enzyme Commision number
2.7.7.7
: DNA-directed DNA polymerase.
Gene Ontology
Molecular Function
GO:0003684
damaged DNA binding
GO:0003887
DNA-directed DNA polymerase activity
Biological Process
GO:0006281
DNA repair
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1t3n
,
PDBe:1t3n
,
PDBj:1t3n
PDBsum
1t3n
PubMed
15254543
UniProt
Q9UNA4
|POLI_HUMAN DNA polymerase iota (Gene Name=POLI)
[
Back to BioLiP
]