Structure of PDB 1p7d Chain B Binding Site BS02

Receptor Information
>1p7d Chain B (length=280) Species: 10710 (Lambdavirus lambda) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLTTKEIAA
MLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSEVR
RSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVD
GYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTR
REPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKF
AQHLLGHKSDTMASQYRDDRGREWDKIEIK
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1p7d A Conformational Switch Controls the DNA Cleavage Activity of Lambda Integrase
Resolution2.95 Å
Binding residue
(original residue number in PDB)
R90 I92 K93 K95 T96 N99 Y100 G214 S234 K235 R276 G283 S286 R287 M290 T306 H308 H333 K334 S335 S340 Q341 Y342
Binding residue
(residue number reindexed from 1)
R17 I19 K20 K22 T23 N26 Y27 G138 S158 K159 R200 G207 S210 R211 M214 T230 H232 H257 K258 S259 S264 Q265 Y266
Enzymatic activity
Enzyme Commision number 2.7.7.-
3.1.-.-
Gene Ontology
Biological Process
GO:0006310 DNA recombination
GO:0015074 DNA integration

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Molecular Function

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Biological Process
External links
PDB RCSB:1p7d, PDBe:1p7d, PDBj:1p7d
PDBsum1p7d
PubMed12887904
UniProtP03700|VINT_LAMBD Integrase (Gene Name=int)

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