Structure of PDB 1od5 Chain B Binding Site BS02

Receptor Information
>1od5 Chain B (length=382) Species: 3847 (Glycine max) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NECQLNNLNALEPDHRVESEGGLIETWNSQHPELQCAGVTVSKRTLNRNG
LHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQDSHQKIRHFNEGD
VLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDI
EHPETMQEGGSVLSGFSKHFLAQSFNTNEDTAEKLRSPDDERKQIVTVEG
GLSVISPKWGVEENICTMKLHENIARPSRADFYNPKAGRISTLNSLTLPA
LRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNCQGNAV
FDGELRRGQLLVVPQNFVVAEQGGEQGLEYVVFKTHHNAVSSYIKDVFRA
IPSEVLSNSYNLGQSQVRQLKYQGNSGPLVNP
Ligand information
Ligand IDCO3
InChIInChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)/p-2
InChIKeyBVKZGUZCCUSVTD-UHFFFAOYSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(=O)([O-])[O-]
ACDLabs 10.04
CACTVS 3.341		[O-]C([O-])=O
FormulaC O3
NameCARBONATE ION
ChEMBL
DrugBankDB14531
ZINC
PDB chain1od5 Chain B Residue 497 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1od5 Crystal Structure of Soybean 11S Globulin: Glycinin A3B4 Homohexamer
Resolution2.1 Å
Binding residue
(original residue number in PDB)		R50 H58 Y131 T133
Binding residue
(residue number reindexed from 1)		R44 H52 Y110 T112
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0045735 nutrient reservoir activity

View graph for
Molecular Function
External links
PDB RCSB:1od5, PDBe:1od5, PDBj:1od5
PDBsum1od5
PubMed12771376
UniProtP04347|GLYG5_SOYBN Glycinin G5 (Gene Name=GY5)

[Back to BioLiP]