Structure of PDB 1o4t Chain B Binding Site BS02
Receptor Information
>1o4t Chain B (length=115) Species:
2336
(Thermotoga maritima) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MVVRSSEITPERISNMRGGKGEVEMAHLLSKEAMHNKARLFARMKLPPGS
SVGLHKHEGEFEIYYILLGEGVFHDNGKDVPIKAGDVCFTDSGESHSIEN
TGNTDLEFLAVIILL
Ligand information
Ligand ID
OXL
InChI
InChI=1S/C2H2O4/c3-1(4)2(5)6/h(H,3,4)(H,5,6)/p-2
InChIKey
MUBZPKHOEPUJKR-UHFFFAOYSA-L
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
[O-]C(=O)C([O-])=O
OpenEye OEToolkits 1.5.0
C(=O)(C(=O)[O-])[O-]
Formula
C2 O4
Name
OXALATE ION
ChEMBL
DrugBank
ZINC
PDB chain
1o4t Chain B Residue 401 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1o4t
Crystal structure of a putative oxalate decarboxylase (TM1287) from Thermotoga maritima at 1.95 A resolution
Resolution
1.95 Å
Binding residue
(original residue number in PDB)
H61 H63 E68 Y70 H102
Binding residue
(residue number reindexed from 1)
H55 H57 E62 Y64 H96
Annotation score
5
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0030145
manganese ion binding
GO:0042802
identical protein binding
GO:0042803
protein homodimerization activity
GO:0046564
oxalate decarboxylase activity
GO:0046872
metal ion binding
Biological Process
GO:0033609
oxalate metabolic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1o4t
,
PDBe:1o4t
,
PDBj:1o4t
PDBsum
1o4t
PubMed
15211523
UniProt
Q9X113
|OXBP_THEMA Oxalate-binding protein (Gene Name=TM_1287)
[
Back to BioLiP
]