Structure of PDB 1o3t Chain B Binding Site BS02
Receptor Information
>1o3t Chain B (length=197) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKE
MILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQV
NPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMT
HPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVV
Ligand information
>1o3t Chain F (length=14) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gcgaaaaatgcgat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1o3t
Indirect Readout of DNA Sequence at the Primary-kink Site in the CAP-DNA Complex: DNA Binding Specificity Based on Energetics of DNA Kinking
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
T168 R169 Q170 R180 E181
Binding residue
(residue number reindexed from 1)
T160 R161 Q162 R172 E173
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003680
minor groove of adenine-thymine-rich DNA binding
GO:0003700
DNA-binding transcription factor activity
GO:0005515
protein binding
GO:0008301
DNA binding, bending
GO:0030552
cAMP binding
GO:0042802
identical protein binding
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006351
DNA-templated transcription
GO:0006355
regulation of DNA-templated transcription
GO:0045013
carbon catabolite repression of transcription
GO:0045892
negative regulation of DNA-templated transcription
GO:0045893
positive regulation of DNA-templated transcription
Cellular Component
GO:0005829
cytosol
GO:0032993
protein-DNA complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1o3t
,
PDBe:1o3t
,
PDBj:1o3t
PDBsum
1o3t
PubMed
11724532
UniProt
P0ACJ8
|CRP_ECOLI DNA-binding transcriptional dual regulator CRP (Gene Name=crp)
[
Back to BioLiP
]