Structure of PDB 1noy Chain B Binding Site BS02

Receptor Information
>1noy Chain B (length=346) Species: 10665 (Tequatrovirus T4) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DEFYISIETVGNNIVERYIDENGKERTREVEYLPTMFRHCKEGKNCAPQK
FPSMKDARDWMKRGMNDFKLAYISDTYGSEIVYDRKFVRVANCDIEVTGD
KFPDPMKAEYEIDAITHYDSIDDRFYVFDLLNSMYGSVSKWDAKLAAKLD
CEGGDEVPQEILDRVIYMPFDNERDMLMEYINLWEQKRPAIFTGWNIEGF
DVPYIMNRVKMILGERSMKRFSPIGRVKSKLSKEIYSIDGVSILDYLDLY
KKFAFTNLPSFSLESVAQHETKKGKLPYDGPINKLRETNHQRYISYNIID
VESVQAIDKIRGFIDLVLSMSYYAKMPFSGVMSPIKTWDAIIFNSL
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain1noy Chain B Residue 3000 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1noy Crystal structures of an NH2-terminal fragment of T4 DNA polymerase and its complexes with single-stranded DNA and with divalent metal ions.
Resolution2.2 Å
Binding residue
(original residue number in PDB)		D112 D219
Binding residue
(residue number reindexed from 1)		D94 D201
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.7.7: DNA-directed DNA polymerase.
3.1.11.-
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:1noy, PDBe:1noy, PDBj:1noy
PDBsum1noy
PubMed8679562
UniProtP04415|DPOL_BPT4 DNA-directed DNA polymerase (Gene Name=43)

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