Structure of PDB 1ng0 Chain B Binding Site BS02

Receptor Information
>1ng0 Chain B (length=192) Species: 40979 (Cocksfoot mottle virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DWFDTGMITSYLGGFQRTAGTTDSQVFIVSPAALDRVGTIAKAYALWRPK
HWEIVYLPRCSTQTDGSIEMGFLLDYADSVPTNTRTMASSTSFTTSNVWG
GGDGSSLLHTSMKSMGNAVTSALPCDEFSNKWFKLSWSTPEESENAHLTD
TYVPARFVVRSDFPVVTADQPGHLWLRSRILLKGSVSPSTNL
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain1ng0 Chain B Residue 1003 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1ng0 The three-dimensional structure of cocksfoot mottle virus at 2.7 A resolution.
Resolution2.7 Å
Binding residue
(original residue number in PDB)		D136 D139
Binding residue
(residue number reindexed from 1)		D75 D78
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003968 RNA-dependent RNA polymerase activity
GO:0005198 structural molecule activity
GO:0008233 peptidase activity
GO:0046872 metal ion binding
Biological Process
GO:0001172 RNA-templated transcription
GO:0006508 proteolysis
Cellular Component
GO:0019028 viral capsid

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1ng0, PDBe:1ng0, PDBj:1ng0
PDBsum1ng0
PubMed12781716
UniProtQ9E958

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