Structure of PDB 1kw6 Chain B Binding Site BS02
Receptor Information
>1kw6 Chain B (length=288) Species:
307
(Pseudomonas sp. KKS102) [
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SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAGDAALYRADQRAWRIA
VQPGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVM
GLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCV
PDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAA
FPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYA
DTPSPMIEVEFGWGPRTVDSSWTVARHSRTAMWGHKSV
Ligand information
Ligand ID
BPY
InChI
InChI=1S/C12H10O2/c13-11-8-4-7-10(12(11)14)9-5-2-1-3-6-9/h1-8,13-14H
InChIKey
YKOQAAJBYBTSBS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
Oc1cccc(c2ccccc2)c1O
OpenEye OEToolkits 1.5.0
c1ccc(cc1)c2cccc(c2O)O
ACDLabs 10.04
Oc2c(c1ccccc1)cccc2O
Formula
C12 H10 O2
Name
BIPHENYL-2,3-DIOL
ChEMBL
DrugBank
DB02923
ZINC
ZINC000000901387
PDB chain
1kw6 Chain B Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
1kw6
Crystal Structures of the Reaction Intermediate and its Homologue of an Extradiol-cleaving Catecholic Dioxygenase
Resolution
1.45 Å
Binding residue
(original residue number in PDB)
H145 F186 H194 F201 H209 H240 N242 Y249 E260 T280
Binding residue
(residue number reindexed from 1)
H145 F186 H194 F201 H209 H240 N242 Y249 E260 T280
Annotation score
5
Enzymatic activity
Enzyme Commision number
1.13.11.39
: biphenyl-2,3-diol 1,2-dioxygenase.
Gene Ontology
Molecular Function
GO:0003824
catalytic activity
GO:0005506
iron ion binding
GO:0008198
ferrous iron binding
GO:0018583
biphenyl-2,3-diol 1,2-dioxygenase activity
GO:0046872
metal ion binding
GO:0051213
dioxygenase activity
Biological Process
GO:0009056
catabolic process
GO:0042178
xenobiotic catabolic process
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Molecular Function
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Biological Process
External links
PDB
RCSB:1kw6
,
PDBe:1kw6
,
PDBj:1kw6
PDBsum
1kw6
PubMed
12206778
UniProt
P17297
|BPHC_PSES1 Biphenyl-2,3-diol 1,2-dioxygenase (Gene Name=bphC)
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